EnhancerDB
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  3. rs190828379[chr16:70783416]
Enhancers that have rs190828379[chr16:70783416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70767165 70796435 enh4122
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 70783169 70783447 vista22889
VISTA
Transcript factors that have rs190828379[chr16:70783416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70783142 70783629 TCF7L2 GTRD no Colon (HCT116) 21713365
chr16 70783142 70783629 TCF7L2 GTRD no Colon (HCT116) 108205310
chr16 70783403 70783417 EBF1 JASPAR yes 11335071
chr16 70783403 70783417 EBF1 JASPAR yes 49389757
chr16 70783416 70783430 TLX1 JASPAR yes 11335074
chr16 70783416 70783430 TLX1 JASPAR yes 49389760
Genes associated with rs190828379[chr16:70783416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More