EnhancerDB
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  3. rs190897362[chr6:39195162]
Enhancers that have rs190897362[chr6:39195162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 39165525 39196155 enh23215
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Liver Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs190897362[chr6:39195162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 39195142 39195162 RREB1 JASPAR yes 101518451
chr6 39195144 39195164 RREB1 JASPAR yes 101518453
chr6 39195145 39195165 RREB1 JASPAR yes 101518456
chr6 39195146 39195167 ZNF263 JASPAR yes 101518458
chr6 39195147 39195167 RREB1 JASPAR yes 101518459
chr6 39195148 39195163 RUNX2 JASPAR yes 101518460
chr6 39195148 39195168 RREB1 JASPAR yes 101518461
chr6 39195150 39195170 RREB1 JASPAR yes 101518463
chr6 39195152 39195172 RREB1 JASPAR yes 101518464
chr6 39195159 39195174 TFAP2C JASPAR yes 101518465
chr6 39195162 39195173 EBF1 JASPAR yes 101518466
Genes associated with rs190897362[chr6:39195162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More