EnhancerDB
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Enhancers that have rs190903206[chr16:29612686]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs190903206[chr16:29612686]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29611112 29613730 ZNF274 GTRD no Bone Marrow (K562) 21702676
chr16 29612400 29612810 ZBTB33 GTRD no Brain (SK-N-SH) 21702693
chr16 29612412 29614034 ZNF143 GTRD no Epithelial (MCF-7) 21702694
chr16 29612420 29614189 TCF7L2 GTRD no Colon (HCT116) 21702695
chr16 29612447 29614063 ZNF274 GTRD no Cervix (HeLa-S3) 21702696
chr16 29612455 29614260 ZNF274 GTRD no Bone Marrow (K562) 21702697
chr16 29612461 29614172 ZNF274 GTRD no Bone Marrow (K562) 21702698
chr16 29612488 29612922 ZBTB33 GTRD no Brain (SK-N-SH) 21702699
chr16 29612563 29614180 ZNF274 GTRD no Bone Marrow (K562) 21702700
chr16 29612584 29612803 ZNF274 GTRD no Cervix (HeLa-S3) 21702701
chr16 29612584 29614179 ZNF274 GTRD no Bone Marrow (K562) 21702702
chr16 29612586 29614179 ZNF274 GTRD no Bone Marrow (K562) 21702703
chr16 29612590 29614234 ZBTB33 GTRD no Lung (A549) 21702704
chr16 29612599 29614171 ZBTB33 GTRD no Brain (SK-N-SH) 21702705
chr16 29612603 29614037 ZNF274 GTRD no Bone Marrow (K562) 21702706
chr16 29612607 29614169 ZNF143 GTRD no Epithelial (MCF-7) 21702707
chr16 29612616 29612971 ZNF274 GTRD no Cervix (HeLa-S3) 21702708
chr16 29612622 29614206 ZNF143 GTRD no Epithelial (MCF-7) 21702709
chr16 29612624 29612769 ZNF274 GTRD no Bone Marrow (K562) 21702710
chr16 29612635 29614323 TCF7L2 GTRD no Colon (HCT116) 21702711
chr16 29612639 29614175 TCF7L2 GTRD no Colon (HCT116) 21702712
chr16 29612644 29614189 ZNF274 GTRD no Bone Marrow (K562) 21702713
chr16 29612664 29614067 ZNF143 GTRD no Epithelial (MCF-7) 21702714
chr16 29612669 29613037 ZNF274 GTRD no Bone Marrow (K562) 21702715
chr16 29612677 29612698 IRF1 JASPAR yes 10266970
chr16 29612678 29612693 STAT2 JASPAR yes 10266971
chr16 29612679 29612693 STAT1 JASPAR yes 10266972
chr16 29612680 29612688 FOXO3 JASPAR yes 10266973
chr16 29612680 29612690 NFATC3 JASPAR yes 10266974
chr16 29612681 29612693 YY1 JASPAR yes 10266975
chr16 29612681 29614340 TCF7L2 GTRD no Colon (HCT116) 21702716
chr16 29612682 29612703 IRF1 JASPAR yes 10266976
chr16 29612683 29612704 IRF1 JASPAR yes 10266977
chr16 29612685 29612706 IRF1 JASPAR yes 10266978
chr16 29612685 29614073 TCF7L2 GTRD no Colon (HCT116) 21702717
chr16 29612686 29612690 YY1 TRANSFAC yes 10266979
chr16 29612686 29612701 FOXP1 JASPAR yes 10266980
chr16 29612686 29612707 IRF1 JASPAR yes 10266981
Genes associated with rs190903206[chr16:29612686], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More