EnhancerDB
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  3. rs190928971[chr17:5740244]
Enhancers that have rs190928971[chr17:5740244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5722485 5740477 enh32064
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs190928971[chr17:5740244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5740227 5740248 IRF1 JASPAR yes 52887395
chr17 5740235 5740250 FOXP1 JASPAR yes 52887397
chr17 5740242 5740249 SPIB JASPAR yes 52887398
Genes associated with rs190928971[chr17:5740244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More