EnhancerDB
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  3. rs190968016[chr12:96635750]
Enhancers that have rs190968016[chr12:96635750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 96635574 96636027 vista14561
VISTA
Transcript factors that have rs190968016[chr12:96635750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96635396 96635750 ZNF143 GTRD no Epithelial (MCF-7) 21567661
chr12 96635396 96635750 ZNF143 GTRD no Epithelial (MCF-7) 108053210
chr12 96635441 96636415 AR GTRD no Prostate (PC-3) 21567662
chr12 96635441 96636415 AR GTRD no Prostate (PC-3) 108053211
chr12 96635441 96636415 AR GTRD no Prostate (PC-3) 108053212
chr12 96635740 96635750 NFKB1 JASPAR yes 82460961
chr12 96635740 96635750 NFKB1 JASPAR yes 123052302
chr12 96635740 96635751 NFKB1 JASPAR yes 82460962
chr12 96635740 96635751 NFKB1 JASPAR yes 123052303
chr12 96635748 96635754 SOX10 JASPAR yes 82460963
chr12 96635748 96635754 SOX10 JASPAR yes 123052304
Genes associated with rs190968016[chr12:96635750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More