EnhancerDB
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  3. rs190988615[chr1:28679748]
Enhancers that have rs190988615[chr1:28679748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28664885 28683047 enh11681
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Stomach
Transcript factors that have rs190988615[chr1:28679748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28679743 28679755 PKNOX1 JASPAR yes 27762230
chr1 28679743 28679755 PKNOX2 JASPAR yes 27762231
chr1 28679743 28679755 TGIF1 JASPAR yes 27762232
chr1 28679743 28679755 TGIF2 JASPAR yes 27762233
chr1 28679748 28679756 MEIS2 JASPAR yes 27762234
chr1 28679748 28679756 MEIS3 JASPAR yes 27762235
Genes associated with rs190988615[chr1:28679748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More