EnhancerDB
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  3. rs190997253[chr1:230207427]
Enhancers that have rs190997253[chr1:230207427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190997253[chr1:230207427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230207418 230207430 PKNOX2 JASPAR yes 36018049
chr1 230207418 230207430 TGIF2 JASPAR yes 36018050
chr1 230207424 230207428 NFE TRANSFAC yes 36018051
Genes associated with rs190997253[chr1:230207427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More