EnhancerDB
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  3. rs191975678[chr1:15534225]
Enhancers that have rs191975678[chr1:15534225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs191975678[chr1:15534225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15534222 15534232 TCF3 JASPAR yes 26970918
chr1 15534223 15534232 SNAI2 JASPAR yes 26970919
chr1 15534224 15534229 USF2 TRANSFAC yes 26970920
Genes associated with rs191975678[chr1:15534225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More