EnhancerDB
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  3. rs192001623[chr1:55335351]
Enhancers that have rs192001623[chr1:55335351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs192001623[chr1:55335351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55335340 55335351 TBX20 JASPAR yes 29002982
chr1 55335341 55335352 E2F6 JASPAR yes 29002984
chr1 55335350 55335365 TFAP2A JASPAR yes 29002987
chr1 55335350 55335365 TFAP2C JASPAR yes 29002988
Genes associated with rs192001623[chr1:55335351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More