EnhancerDB
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  3. rs192048835[chr1:230224953]
Enhancers that have rs192048835[chr1:230224953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs192048835[chr1:230224953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230224949 230224959 SREBF1 JASPAR yes 36020392
chr1 230224949 230224959 SREBF2 JASPAR yes 36020393
chr1 230224949 230224959 TBX21 JASPAR yes 36020394
chr1 230224949 230224962 EOMES JASPAR yes 36020395
chr1 230224950 230224958 MGA JASPAR yes 36020396
Genes associated with rs192048835[chr1:230224953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More