EnhancerDB
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  3. rs192543390[chr1:41969564]
Enhancers that have rs192543390[chr1:41969564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs192543390[chr1:41969564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41969556 41969566 MAX JASPAR yes 28396535
chr1 41969556 41969567 USF1 JASPAR yes 28396536
chr1 41969556 41969567 USF2 JASPAR yes 28396537
chr1 41969557 41969567 BHLHE40 JASPAR yes 28396538
chr1 41969557 41969567 BHLHE41 JASPAR yes 28396539
chr1 41969557 41969567 MAX JASPAR yes 28396540
chr1 41969557 41969567 MLXIPL JASPAR yes 28396541
chr1 41969557 41969567 MLX JASPAR yes 28396542
chr1 41969557 41969567 MNT JASPAR yes 28396543
chr1 41969557 41969567 SREBF2 JASPAR yes 28396544
chr1 41969557 41969567 TFE3 JASPAR yes 28396545
chr1 41969557 41969567 TFEB JASPAR yes 28396546
chr1 41969557 41969567 TFEC JASPAR yes 28396547
chr1 41969557 41969568 USF1 JASPAR yes 28396548
chr1 41969557 41969568 USF2 JASPAR yes 28396549
chr1 41969558 41969565 USF1 JASPAR yes 28396550
chr1 41969558 41969568 MAX JASPAR yes 28396551
chr1 41969559 41969564 MYC TRANSFAC yes 28396552
chr1 41969559 41969564 USF1 TRANSFAC yes 28396553
chr1 41969559 41969564 USF2 TRANSFAC yes 28396554
Genes associated with rs192543390[chr1:41969564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More