EnhancerDB
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  3. rs192596509[chr6:40870563]
Enhancers that have rs192596509[chr6:40870563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40860718 40877784 enh55742
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Adrenal Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Heart
Transcript factors that have rs192596509[chr6:40870563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40870554 40870565 CDX2 JASPAR yes 101618130
chr6 40870555 40870566 HOXA10 JASPAR yes 101618131
chr6 40870555 40870566 HOXC11 JASPAR yes 101618132
chr6 40870555 40870566 HOXC12 JASPAR yes 101618133
chr6 40870555 40870566 HOXD12 JASPAR yes 101618134
chr6 40870556 40870565 CDX1 JASPAR yes 101618135
chr6 40870556 40870566 HOXA13 JASPAR yes 101618136
chr6 40870556 40870566 HOXC10 JASPAR yes 101618137
chr6 40870556 40870566 HOXD11 JASPAR yes 101618138
Genes associated with rs192596509[chr6:40870563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More