EnhancerDB
  1. Home
  2. SNP
  3. rs192648521[chr1:201540860]
Enhancers that have rs192648521[chr1:201540860]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs192648521[chr1:201540860]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201537319 201541087 ZNF143 GTRD no Epithelial (MCF-7) 107856678
chr1 201538197 201541749 ZNF143 GTRD no Epithelial (MCF-7) 107856687
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 21364790
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 107856689
chr1 201539279 201540974 ZNF274 GTRD no Bone Marrow (K562) 21364805
chr1 201539279 201540974 ZNF274 GTRD no Bone Marrow (K562) 107856691
chr1 201539501 201540863 ZNF274 GTRD no Bone Marrow (K562) 21364813
chr1 201539501 201540863 ZNF274 GTRD no Bone Marrow (K562) 107856694
chr1 201539502 201540897 ZNF274 GTRD no Bone Marrow (K562) 21364814
chr1 201539502 201540897 ZNF274 GTRD no Bone Marrow (K562) 107856695
chr1 201540264 201541320 ZNF274 GTRD no Bone Marrow (K562) 21364837
chr1 201540264 201541320 ZNF274 GTRD no Bone Marrow (K562) 107856717
chr1 201540445 201541482 ZNF143 GTRD no Epithelial (MCF-7) 107856722
chr1 201540493 201541427 ZNF143 GTRD no Epithelial (MCF-7) 107856723
chr1 201540520 201541463 ZNF143 GTRD no Epithelial (MCF-7) 107856724
chr1 201540848 201540863 PRDM1 JASPAR yes 34508421
chr1 201540856 201540864 EHF JASPAR yes 34508422
chr1 201540857 201540875 SRF JASPAR yes 34508423
chr1 201540860 201540872 SRF JASPAR yes 34508424
Genes associated with rs192648521[chr1:201540860], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More