EnhancerDB
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  3. rs192665055[chr1:17880409]
Enhancers that have rs192665055[chr1:17880409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs192665055[chr1:17880409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17880302 17880798 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107802267
chr1 17880394 17880409 SCRT1 JASPAR yes 27100917
chr1 17880394 17880409 ZIC3 JASPAR yes 27100918
chr1 17880394 17880409 ZIC4 JASPAR yes 27100919
chr1 17880395 17880409 ZIC1 JASPAR yes 27100920
Genes associated with rs192665055[chr1:17880409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More