EnhancerDB
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Enhancers that have rs193030143[chr17:79696321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs193030143[chr17:79696321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694625 79696438 ZNF143 GTRD no Epithelial (MCF-7) 21798282
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79695114 79696462 ZNF143 GTRD no Epithelial (MCF-7) 21798293
chr17 79695453 79696441 ZNF143 GTRD no Epithelial (MCF-7) 21798294
chr17 79695455 79696490 ZNF143 GTRD no Epithelial (MCF-7) 21798295
chr17 79695541 79696365 ZNF143 GTRD no Epithelial (MCF-7) 21798296
chr17 79695710 79696362 ZNF143 GTRD no Epithelial (MCF-7) 21798298
chr17 79696055 79697711 TCF7L2 GTRD no Colon (HCT116) 21798304
chr17 79696070 79696577 TCF7L2 GTRD no Colon (HCT116) 21798305
chr17 79696316 79696330 PLAG1 JASPAR yes 56340129
chr17 79696316 79696331 NR2C2 JASPAR yes 56340130
Genes associated with rs193030143[chr17:79696321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 79910388 79919716 - NOTUM ENSG00000185269.7 79919716 214067 Breast 0.0903564 16377
chr17 80612849 80656604 - RAB40B ENSG00000141542.6 80656604 916528 Stomach 0.321178 16401