EnhancerDB
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  3. rs193113978[chr2:216698406]
Enhancers that have rs193113978[chr2:216698406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216688425 216718115 enh6146
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs193113978[chr2:216698406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216698389 216698410 IRF1 JASPAR yes 80811700
chr2 216698393 216698408 STAT2 JASPAR yes 80811701
chr2 216698397 216698408 NFKB1 JASPAR yes 80811703
chr2 216698398 216698408 RELA JASPAR yes 80811704
chr2 216698398 216698408 REL JASPAR yes 80811705
chr2 216698405 216698409 H1TF2 TRANSFAC yes 80811706
chr2 216698405 216698409 NFE TRANSFAC yes 80811707
chr2 216698405 216698409 SRF TRANSFAC yes 80811708
Genes associated with rs193113978[chr2:216698406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More