EnhancerDB
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  3. rs193172499[chr2:39318001]
Enhancers that have rs193172499[chr2:39318001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs193172499[chr2:39318001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39317988 39318004 SOX8 JASPAR yes 73180442
chr2 39317993 39318013 RREB1 JASPAR yes 73180444
chr2 39317996 39318016 RREB1 JASPAR yes 73180446
chr2 39318000 39318020 RREB1 JASPAR yes 73180447
chr2 39318001 39318021 RREB1 JASPAR yes 73180448
Genes associated with rs193172499[chr2:39318001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More