EnhancerDB
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  3. rs193199245[chr17:70420945]
Enhancers that have rs193199245[chr17:70420945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs193199245[chr17:70420945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784993
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290126
chr17 70420495 70420995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785087
chr17 70420718 70420954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785088
chr17 70420935 70420945 SP1 JASPAR yes 55786659
Genes associated with rs193199245[chr17:70420945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More