EnhancerDB
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  3. rs1933248[chr1:235439323]
Enhancers that have rs1933248[chr1:235439323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235432005 235446995 enh999
Large Intestine Blood (T-cell) Astrocyte Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs1933248[chr1:235439323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235439316 235439332 T JASPAR yes 36359095
chr1 235439320 235439328 TBX5 JASPAR yes 36359096
chr1 235439320 235439329 ZEB1 JASPAR yes 36359097
chr1 235439320 235439335 SCRT1 JASPAR yes 36359098
chr1 235439321 235439331 FIGLA JASPAR yes 36359099
chr1 235439321 235439331 ID4 JASPAR yes 36359100
chr1 235439321 235439331 TCF3 JASPAR yes 36359101
chr1 235439321 235439331 TCF4 JASPAR yes 36359102
chr1 235439322 235439331 SNAI2 JASPAR yes 36359103
chr1 235439322 235439335 SCRT2 JASPAR yes 36359104
chr1 235439323 235439328 USF2 TRANSFAC yes 36359105
Genes associated with rs1933248[chr1:235439323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More