EnhancerDB
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  3. rs1962394[chr3:129347973]
Enhancers that have rs1962394[chr3:129347973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 129325490 129349015 enh7530
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Heart
Transcript factors that have rs1962394[chr3:129347973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 129347962 129347983 REST JASPAR yes 5672812
chr3 129347973 129347977 LFA1 TRANSFAC yes 5672813
Genes associated with rs1962394[chr3:129347973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More