EnhancerDB
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  3. rs1978727[chr19:1208399]
Enhancers that have rs1978727[chr19:1208399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs1978727[chr19:1208399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1204535 1208598 TCF7L2 GTRD no Colon (HCT116) 21831760
chr19 1204535 1208598 TCF7L2 GTRD no Colon (HCT116) 108351157
chr19 1204874 1208511 ZNF274 GTRD no Blood (GM12878) 108351159
chr19 1204948 1208400 ZNF274 GTRD no Bone Marrow (K562) 21831762
chr19 1204948 1208400 ZNF274 GTRD no Bone Marrow (K562) 108351160
chr19 1204973 1208507 ZNF274 GTRD no Bone Marrow (K562) 21831763
chr19 1204973 1208507 ZNF274 GTRD no Bone Marrow (K562) 108351161
chr19 1205025 1208739 ZNF274 GTRD no Bone Marrow (K562) 21831764
chr19 1205025 1208739 ZNF274 GTRD no Bone Marrow (K562) 108351162
chr19 1205130 1208766 TCF7L2 GTRD no Colon (HCT116) 21831766
chr19 1205130 1208766 TCF7L2 GTRD no Colon (HCT116) 108351165
chr19 1205458 1208605 ZNF274 GTRD no Bone Marrow (K562) 21831768
chr19 1205458 1208605 ZNF274 GTRD no Bone Marrow (K562) 108351167
chr19 1205712 1209405 ZNF274 GTRD no Bone Marrow (K562) 21831769
chr19 1205712 1209405 ZNF274 GTRD no Bone Marrow (K562) 108351168
chr19 1206106 1208605 ZNF274 GTRD no Bone Marrow (K562) 21831770
chr19 1206106 1208605 ZNF274 GTRD no Bone Marrow (K562) 108351169
chr19 1206183 1208637 ZNF274 GTRD no Bone Marrow (K562) 21831771
chr19 1206183 1208637 ZNF274 GTRD no Bone Marrow (K562) 108351171
chr19 1206195 1208405 ZNF274 GTRD no Blood (GM12878) 108351172
chr19 1206250 1208462 ZNF274 GTRD no Bone Marrow (K562) 21831773
chr19 1206250 1208462 ZNF274 GTRD no Bone Marrow (K562) 108351174
chr19 1206285 1208497 ZNF274 GTRD no Blood (GM12878) 108351175
chr19 1206322 1208476 ZNF274 GTRD no Bone Marrow (K562) 21831774
chr19 1206322 1208476 ZNF274 GTRD no Bone Marrow (K562) 108351176
chr19 1206341 1208785 ZNF274 GTRD no Bone Marrow (K562) 21831775
chr19 1206341 1208785 ZNF274 GTRD no Bone Marrow (K562) 108351177
chr19 1206344 1208405 ZBTB33 GTRD no Lung (A549) 108351178
chr19 1206433 1208627 ZNF274 GTRD no Bone Marrow (K562) 21831776
chr19 1206433 1208627 ZNF274 GTRD no Bone Marrow (K562) 108351183
chr19 1206447 1208505 ZNF274 GTRD no Liver (HepG2) 21831777
chr19 1206447 1208505 ZNF274 GTRD no Liver (HepG2) 108351184
chr19 1206575 1208506 ZNF274 GTRD no Bone Marrow (K562) 21831780
chr19 1206575 1208506 ZNF274 GTRD no Bone Marrow (K562) 108351187
chr19 1206655 1208429 ZNF274 GTRD no Bone Marrow (K562) 21831781
chr19 1206655 1208429 ZNF274 GTRD no Bone Marrow (K562) 108351188
chr19 1206668 1208469 ZNF274 GTRD no Bone Marrow (K562) 21831782
chr19 1206668 1208469 ZNF274 GTRD no Bone Marrow (K562) 108351189
chr19 1206690 1208454 ZNF143 GTRD no Epithelial (MCF-7) 108351191
chr19 1206780 1208473 ZNF274 GTRD no Bone Marrow (K562) 21831784
chr19 1206780 1208473 ZNF274 GTRD no Bone Marrow (K562) 108351194
chr19 1206781 1208431 ZNF274 GTRD no Bone Marrow (K562) 21831785
chr19 1206781 1208431 ZNF274 GTRD no Bone Marrow (K562) 108351195
chr19 1206814 1208436 ZNF143 GTRD no Epithelial (MCF-7) 108351199
chr19 1206860 1208400 ZBTB33 GTRD no Brain (SK-N-SH) 21831787
chr19 1206860 1208400 ZBTB33 GTRD no Brain (SK-N-SH) 108351204
chr19 1206877 1208469 ZNF143 GTRD no Epithelial (MCF-7) 108351205
chr19 1206891 1208799 ZNF274 GTRD no Bone Marrow (K562) 21831788
chr19 1206891 1208799 ZNF274 GTRD no Bone Marrow (K562) 108351207
chr19 1206945 1208795 ZNF274 GTRD no Bone Marrow (K562) 21831791
chr19 1206945 1208795 ZNF274 GTRD no Bone Marrow (K562) 108351210
chr19 1206989 1208461 ZNF274 GTRD no Bone Marrow (K562) 21831793
chr19 1206989 1208461 ZNF274 GTRD no Bone Marrow (K562) 108351212
chr19 1207023 1208501 ZNF274 GTRD no Bone Marrow (K562) 21831796
chr19 1207023 1208501 ZNF274 GTRD no Bone Marrow (K562) 108351216
chr19 1207027 1208777 ZNF274 GTRD no Bone Marrow (K562) 21831797
chr19 1207027 1208777 ZNF274 GTRD no Bone Marrow (K562) 108351217
chr19 1207036 1208494 ZNF274 GTRD no Bone Marrow (K562) 21831798
chr19 1207036 1208494 ZNF274 GTRD no Bone Marrow (K562) 108351219
chr19 1207040 1208441 ZNF274 GTRD no Bone Marrow (K562) 21831799
chr19 1207040 1208441 ZNF274 GTRD no Bone Marrow (K562) 108351220
chr19 1207041 1208407 ZNF274 GTRD no Bone Marrow (K562) 21831800
chr19 1207041 1208407 ZNF274 GTRD no Bone Marrow (K562) 108351221
chr19 1207042 1208771 ZNF274 GTRD no Bone Marrow (K562) 21831801
chr19 1207042 1208771 ZNF274 GTRD no Bone Marrow (K562) 108351222
chr19 1207067 1208506 ZNF143 GTRD no Epithelial (MCF-7) 108351223
chr19 1207295 1208402 ZNF274 GTRD no Bone Marrow (K562) 21831814
chr19 1207295 1208402 ZNF274 GTRD no Bone Marrow (K562) 108351245
chr19 1207310 1208489 ZNF274 GTRD no Bone Marrow (K562) 21831815
chr19 1207310 1208489 ZNF274 GTRD no Bone Marrow (K562) 108351246
chr19 1207336 1208717 ZNF143 GTRD no Epithelial (MCF-7) 108351254
chr19 1207343 1208617 ZNF143 GTRD no Epithelial (MCF-7) 108351257
chr19 1207394 1208414 ZNF143 GTRD no Epithelial (MCF-7) 108351264
chr19 1207397 1208408 ZNF143 GTRD no Epithelial (MCF-7) 108351265
chr19 1207398 1208514 ZNF274 GTRD no Bone Marrow (K562) 21831824
chr19 1207398 1208514 ZNF274 GTRD no Bone Marrow (K562) 108351266
chr19 1207425 1208519 ZNF274 GTRD no Bone Marrow (K562) 21831825
chr19 1207425 1208519 ZNF274 GTRD no Bone Marrow (K562) 108351269
chr19 1207427 1208494 ZNF274 GTRD no Blood (GM12878) 108351270
chr19 1207440 1208438 ZNF143 GTRD no Epithelial (MCF-7) 108351273
chr19 1207484 1208613 ZNF143 GTRD no Epithelial (MCF-7) 108351286
chr19 1207487 1208400 ZNF274 GTRD no Bone Marrow (K562) 21831837
chr19 1207487 1208400 ZNF274 GTRD no Bone Marrow (K562) 108351287
chr19 1207514 1208491 ZNF143 GTRD no Epithelial (MCF-7) 108351289
chr19 1207522 1208478 ZNF143 GTRD no Epithelial (MCF-7) 108351290
chr19 1207612 1208699 ZNF143 GTRD no Epithelial (MCF-7) 108351297
chr19 1207625 1208501 ZNF143 GTRD no Epithelial (MCF-7) 108351298
chr19 1207641 1208637 ZNF143 GTRD no Epithelial (MCF-7) 108351300
chr19 1207656 1208504 ZNF143 GTRD no Epithelial (MCF-7) 108351301
chr19 1207703 1208433 ZNF274 GTRD no Blood (GM12878) 108351308
chr19 1207703 1208504 TCF7L2 GTRD no Colon (HCT116) 21831847
chr19 1207703 1208504 TCF7L2 GTRD no Colon (HCT116) 108351309
chr19 1207727 1208489 ZNF274 GTRD no Bone Marrow (K562) 21831849
chr19 1207727 1208489 ZNF274 GTRD no Bone Marrow (K562) 108351311
chr19 1207774 1208399 ZNF143 GTRD no Epithelial (MCF-7) 108351317
chr19 1207781 1208489 ZNF274 GTRD no Blood (GM12878) 108351318
chr19 1207790 1208467 ZNF143 GTRD no Epithelial (MCF-7) 108351319
chr19 1207799 1208505 ZNF143 GTRD no Epithelial (MCF-7) 108351323
chr19 1207911 1208615 ZNF274 GTRD no Bone Marrow (K562) 21831891
chr19 1207911 1208615 ZNF274 GTRD no Bone Marrow (K562) 108351378
chr19 1207924 1208429 TCF7L2 GTRD no Colon (HCT116) 21831895
chr19 1207924 1208429 TCF7L2 GTRD no Colon (HCT116) 108351386
Genes associated with rs1978727[chr19:1208399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More