EnhancerDB
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Enhancers that have rs1987164[chr17:46569052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs1987164[chr17:46569052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46568909 46569385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108268258
chr17 46568958 46569328 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767732
chr17 46568958 46569328 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108268259
chr17 46568960 46569344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767733
chr17 46568960 46569344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108268260
chr17 46568977 46569327 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767734
chr17 46568977 46569327 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108268261
chr17 46568989 46569353 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767735
chr17 46568989 46569353 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108268262
chr17 46569028 46569258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767736
chr17 46569028 46569258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108268263
chr17 46569035 46569056 IRF1 JASPAR yes 54589440
chr17 46569039 46569054 PRDM1 JASPAR yes 54589441
chr17 46569040 46569052 IRF1 JASPAR yes 54589442
Genes associated with rs1987164[chr17:46569052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More