EnhancerDB
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  3. rs199531959[chr17:39838467]
Enhancers that have rs199531959[chr17:39838467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs199531959[chr17:39838467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39838460 39838481 IRF1 JASPAR yes 54273184
chr17 39838463 39838469 TBP TRANSFAC yes 54273185
chr17 39838464 39838479 PRDM1 JASPAR yes 54273186
Genes associated with rs199531959[chr17:39838467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 40819932 40829048 - PLEKHH3 ENSG00000068137.10 40829048 981465 Uterus 0.375092 15871
chr17 39775692 39943183 - JUP ENSG00000173801.12 39943183 0 Lung 0.24567 15836