EnhancerDB
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  3. rs199532236[chr1:203662713]
Enhancers that have rs199532236[chr1:203662713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203658645 203666475 enh12564
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203660971 203662806 vista126
VISTA
Transcript factors that have rs199532236[chr1:203662713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203661217 203664886 TCF7L2 GTRD no Colon (HCT116) 21369829
chr1 203661217 203664886 TCF7L2 GTRD no Colon (HCT116) 107859340
chr1 203662706 203662724 SRF JASPAR yes 34656948
chr1 203662706 203662724 SRF JASPAR yes 71155168
chr1 203662707 203662724 RARA JASPAR yes 34656949
chr1 203662707 203662724 RARA JASPAR yes 71155169
chr1 203662709 203662721 SRF JASPAR yes 34656951
chr1 203662709 203662721 SRF JASPAR yes 71155171
Genes associated with rs199532236[chr1:203662713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More