EnhancerDB
  1. Home
  2. SNP
  3. rs199552400[chr6:41495063]
Enhancers that have rs199552400[chr6:41495063]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41483885 41508635 enh38996
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Thyroid Breast Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs199552400[chr6:41495063]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41495057 41495071 POU4F1 JASPAR yes 101655049
chr6 41495057 41495073 POU4F2 JASPAR yes 101655050
chr6 41495057 41495073 POU4F3 JASPAR yes 101655051
chr6 41495059 41495073 FOXF2 JASPAR yes 101655052
chr6 41495059 41495073 ONECUT3 JASPAR yes 101655053
chr6 41495059 41495074 FOXP1 JASPAR yes 101655054
chr6 41495061 41495073 FOXC2 JASPAR yes 101655055
Genes associated with rs199552400[chr6:41495063], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More