EnhancerDB
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  3. rs199574987[chr1:15500188]
Enhancers that have rs199574987[chr1:15500188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs199574987[chr1:15500188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15500170 15500191 IRF1 JASPAR yes 26966552
chr1 15500173 15500188 FOXP1 JASPAR yes 26966555
chr1 15500174 15500189 STAT2 JASPAR yes 26966556
chr1 15500175 15500190 FOXP1 JASPAR yes 26966557
chr1 15500177 15500197 RREB1 JASPAR yes 26966558
chr1 15500178 15500189 FOXP2 JASPAR yes 26966559
chr1 15500182 15500188 HiNF-A TRANSFAC yes 26966560
chr1 15500183 15500195 FOXC2 JASPAR yes 26966561
chr1 15500184 15500196 FOXI1 JASPAR yes 26966562
Genes associated with rs199574987[chr1:15500188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More