EnhancerDB
  1. Home
  2. SNP
  3. rs199578727[chr17:43424320]
Enhancers that have rs199578727[chr17:43424320]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43404711 43426395 enh17187
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Uterus Thymus Heart
Transcript factors that have rs199578727[chr17:43424320]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43424307 43424320 POU2F2 JASPAR yes 54447321
chr17 43424307 43424321 POU1F1 JASPAR yes 54447322
chr17 43424308 43424320 POU3F1 JASPAR yes 54447323
chr17 43424308 43424320 POU3F2 JASPAR yes 54447324
chr17 43424308 43424321 POU3F3 JASPAR yes 54447325
chr17 43424309 43424321 POU2F1 JASPAR yes 54447327
chr17 43424317 43424331 RORA JASPAR yes 54447334
chr17 43424320 43424330 RORA JASPAR yes 54447335
Genes associated with rs199578727[chr17:43424320], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More