EnhancerDB
  1. Home
  2. SNP
  3. rs199588248[chr12:96621905]
Enhancers that have rs199588248[chr12:96621905]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199588248[chr12:96621905]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96621899 96621913 SPI1 JASPAR yes 123050169
chr12 96621902 96621916 SPI1 JASPAR yes 123050170
Genes associated with rs199588248[chr12:96621905], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More