EnhancerDB
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  3. rs199605674[chr1:180130388]
Enhancers that have rs199605674[chr1:180130388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180124885 180142635 enh12422
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs199605674[chr1:180130388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180130373 180130388 HNF1A JASPAR yes 33505079
chr1 180130376 180130391 FOXA1 JASPAR yes 33505098
chr1 180130378 180130390 FOXC2 JASPAR yes 33505099
chr1 180130378 180130391 POU2F2 JASPAR yes 33505100
chr1 180130378 180130392 POU1F1 JASPAR yes 33505101
chr1 180130379 180130390 FOXB1 JASPAR yes 33505102
chr1 180130379 180130390 FOXC1 JASPAR yes 33505103
chr1 180130379 180130391 POU3F1 JASPAR yes 33505104
chr1 180130379 180130391 POU3F2 JASPAR yes 33505105
chr1 180130379 180130392 POU3F3 JASPAR yes 33505106
chr1 180130380 180130391 FOXA1 JASPAR yes 33505108
chr1 180130380 180130392 POU2F1 JASPAR yes 33505109
chr1 180130381 180130390 POU3F4 JASPAR yes 33505110
chr1 180130381 180130390 POU5F1B JASPAR yes 33505111
chr1 180130382 180130390 FOXL1 JASPAR yes 33505112
Genes associated with rs199605674[chr1:180130388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More