EnhancerDB
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  3. rs199717425[chr1:183249872]
Enhancers that have rs199717425[chr1:183249872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183245029 183258743 enh12449
Cervix (HeLa-S3) Ovary Esophagus Bone (Osteoblast) Lung Stomach Placenta Breast Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs199717425[chr1:183249872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183249071 183250181 ZNF143 GTRD no Epithelial (MCF-7) 107850740
chr1 183249109 183250195 ZNF143 GTRD no Epithelial (MCF-7) 107850747
chr1 183249129 183250101 ZNF143 GTRD no Epithelial (MCF-7) 107850748
chr1 183249135 183250036 ZNF143 GTRD no Epithelial (MCF-7) 107850750
chr1 183249143 183250057 AR GTRD no Prostate (PC-3) 107850751
chr1 183249187 183250083 ZNF143 GTRD no Epithelial (MCF-7) 107850752
chr1 183249202 183250085 ZNF143 GTRD no Epithelial (MCF-7) 107850753
chr1 183249210 183250252 ZNF143 GTRD no Epithelial (MCF-7) 107850754
chr1 183249242 183249959 ZNF143 GTRD no Epithelial (MCF-7) 107850755
chr1 183249276 183249986 ZNF143 GTRD no Epithelial (MCF-7) 107850756
chr1 183249294 183250204 ZNF143 GTRD no Epithelial (MCF-7) 107850757
chr1 183249299 183250208 ZNF143 GTRD no Epithelial (MCF-7) 107850758
chr1 183249313 183250163 ZNF143 GTRD no Epithelial (MCF-7) 107850760
chr1 183249357 183249897 ZNF143 GTRD no Epithelial (MCF-7) 107850762
chr1 183249437 183250123 ZNF143 GTRD no Epithelial (MCF-7) 107850767
chr1 183249860 183249881 IRF1 JASPAR yes 33668807
chr1 183249862 183249883 IRF1 JASPAR yes 33668808
chr1 183249867 183249882 FOXP1 JASPAR yes 33668809
Genes associated with rs199717425[chr1:183249872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More