EnhancerDB
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  3. rs199728202[chr12:116871947]
Enhancers that have rs199728202[chr12:116871947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116856325 116876915 enh15028
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs199728202[chr12:116871947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116871844 116872504 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21576947
chr12 116871844 116872504 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108061539
chr12 116871846 116872322 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21576948
chr12 116871846 116872322 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108061540
chr12 116871859 116872515 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21576949
chr12 116871859 116872515 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108061541
chr12 116871882 116872158 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21576950
chr12 116871882 116872158 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061542
chr12 116871913 116872323 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21576951
chr12 116871913 116872323 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108061543
chr12 116871915 116872455 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21576952
chr12 116871915 116872455 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108061544
chr12 116871928 116872318 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21576953
chr12 116871928 116872318 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061545
chr12 116871939 116871949 POU6F2 JASPAR yes 123994911
chr12 116871940 116871950 ALX3 JASPAR yes 123994912
chr12 116871940 116871950 ESX1 JASPAR yes 123994913
chr12 116871940 116871950 GSX2 JASPAR yes 123994914
chr12 116871940 116871950 HESX1 JASPAR yes 123994915
chr12 116871940 116871950 LHX6 JASPAR yes 123994916
chr12 116871940 116871950 MIXL1 JASPAR yes 123994917
chr12 116871940 116871950 MNX1 JASPAR yes 123994918
chr12 116871940 116871950 NOTO JASPAR yes 123994919
chr12 116871940 116871950 RAX JASPAR yes 123994920
chr12 116871940 116871951 HOXA10 JASPAR yes 123994921
chr12 116871941 116871949 ISX JASPAR yes 123994922
chr12 116871941 116871949 LMX1A JASPAR yes 123994923
chr12 116871941 116871949 LMX1B JASPAR yes 123994924
chr12 116871941 116871949 NKX6-1 JASPAR yes 123994925
chr12 116871941 116871949 NKX6-2 JASPAR yes 123994926
chr12 116871941 116871949 PRRX1 JASPAR yes 123994927
chr12 116871941 116871949 RAX2 JASPAR yes 123994928
chr12 116871941 116871949 SHOX JASPAR yes 123994929
chr12 116871941 116871949 UNCX JASPAR yes 123994930
chr12 116871941 116871949 VAX1 JASPAR yes 123994931
chr12 116871942 116871963 IRF1 JASPAR yes 123994932
chr12 116871943 116871964 IRF1 JASPAR yes 123994933
chr12 116871944 116871959 FOXP1 JASPAR yes 123994934
chr12 116871946 116871952 TBP TRANSFAC yes 123994935
chr12 116871946 116872430 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21576954
chr12 116871946 116872430 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108061546
Genes associated with rs199728202[chr12:116871947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More