EnhancerDB
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  3. rs199730939[chr5:171573057]
Enhancers that have rs199730939[chr5:171573057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs199730939[chr5:171573057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171573051 171573065 MTF1 JASPAR yes 67767618
chr5 171573052 171573066 XBP1 JASPAR yes 67767619
chr5 171573053 171573067 BATF3 JASPAR yes 67767620
chr5 171573057 171573069 CREB1 JASPAR yes 67767621
Genes associated with rs199730939[chr5:171573057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More