EnhancerDB
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  3. rs199762871[chr5:171862428]
Enhancers that have rs199762871[chr5:171862428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199762871[chr5:171862428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171862423 171862435 FOXI1 JASPAR yes 67789736
chr5 171862423 171862443 RREB1 JASPAR yes 67789737
chr5 171862424 171862444 RREB1 JASPAR yes 67789738
chr5 171862426 171862430 YY1 TRANSFAC yes 67789739
chr5 171862427 171862439 FOXI1 JASPAR yes 67789740
chr5 171862427 171862447 RREB1 JASPAR yes 67789741
chr5 171862428 171862448 RREB1 JASPAR yes 67789742
Genes associated with rs199762871[chr5:171862428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More