EnhancerDB
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  3. rs199803962[chr19:2506513]
Enhancers that have rs199803962[chr19:2506513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs199803962[chr19:2506513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2506505 2506526 IRF1 JASPAR yes 112067922
chr19 2506506 2506521 FOXP1 JASPAR yes 112067923
chr19 2506509 2506523 SPIC JASPAR yes 112067924
chr19 2506509 2506523 STAT1 JASPAR yes 112067925
chr19 2506509 2506524 PRDM1 JASPAR yes 112067926
chr19 2506509 2506524 STAT2 JASPAR yes 112067927
chr19 2506509 2506530 IRF1 JASPAR yes 112067928
Genes associated with rs199803962[chr19:2506513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More