EnhancerDB
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  3. rs199886088[chr2:30498511]
Enhancers that have rs199886088[chr2:30498511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30485185 30500266 enh18412
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199886088[chr2:30498511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30498501 30498522 IRF1 JASPAR yes 72752043
chr2 30498502 30498514 FOXC2 JASPAR yes 72752044
chr2 30498503 30498514 FOXC1 JASPAR yes 72752045
chr2 30498503 30498518 PRDM1 JASPAR yes 72752046
chr2 30498504 30498518 STAT1 JASPAR yes 72752048
chr2 30498505 30498526 IRF1 JASPAR yes 72752049
chr2 30498506 30498521 FOXP1 JASPAR yes 72752050
chr2 30498511 30498526 FOXP1 JASPAR yes 72752051
Genes associated with rs199886088[chr2:30498511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More