EnhancerDB
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  3. rs199904339[chr17:74793254]
Enhancers that have rs199904339[chr17:74793254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74776823 74795815 enh17393
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs199904339[chr17:74793254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74793241 74793254 ELF1 JASPAR yes 56025524
chr17 74793241 74793255 SPI1 JASPAR yes 56025525
chr17 74793247 74793257 ALX3 JASPAR yes 56025526
chr17 74793247 74793257 GSX2 JASPAR yes 56025527
chr17 74793247 74793257 MIXL1 JASPAR yes 56025528
chr17 74793248 74793256 ISX JASPAR yes 56025529
chr17 74793248 74793256 LHX9 JASPAR yes 56025530
chr17 74793248 74793256 LMX1B JASPAR yes 56025531
chr17 74793248 74793256 PRRX1 JASPAR yes 56025532
chr17 74793248 74793256 RAX2 JASPAR yes 56025533
chr17 74793248 74793256 SHOX JASPAR yes 56025534
chr17 74793248 74793256 UNCX JASPAR yes 56025535
chr17 74793249 74793270 IRF1 JASPAR yes 56025536
chr17 74793251 74793272 IRF1 JASPAR yes 56025537
chr17 74793253 74793259 TBP TRANSFAC yes 56025538
Genes associated with rs199904339[chr17:74793254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More