EnhancerDB
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  3. rs199976416[chr2:204452252]
Enhancers that have rs199976416[chr2:204452252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs199976416[chr2:204452252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204452245 204452260 FOXP1 JASPAR yes 80243156
chr2 204452247 204452267 RREB1 JASPAR yes 80243157
chr2 204452248 204452259 FOXP2 JASPAR yes 80243158
chr2 204452249 204452264 FOXP1 JASPAR yes 80243159
chr2 204452250 204452261 FOXA1 JASPAR yes 80243160
chr2 204452250 204452265 FOXA1 JASPAR yes 80243161
chr2 204452251 204452263 FOXC2 JASPAR yes 80243162
chr2 204452252 204452264 FOXI1 JASPAR yes 80243163
Genes associated with rs199976416[chr2:204452252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More