EnhancerDB
  1. Home
  2. SNP
  3. rs199981849[chr1:12553125]
Enhancers that have rs199981849[chr1:12553125]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs199981849[chr1:12553125]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12553117 12553128 DUX4 JASPAR yes 26825949
chr1 12553119 12553140 IRF1 JASPAR yes 26825950
chr1 12553121 12553136 STAT2 JASPAR yes 26825951
chr1 12553122 12553143 IRF1 JASPAR yes 26825952
chr1 12553124 12553139 FOXP1 JASPAR yes 26825953
chr1 12553125 12553140 FOXP1 JASPAR yes 26825954
Genes associated with rs199981849[chr1:12553125], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More