EnhancerDB
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  3. rs200001573[chr2:232505019]
Enhancers that have rs200001573[chr2:232505019]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232503025 232517415 enh19322
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200001573[chr2:232505019]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232505016 232505031 FOXP1 JASPAR yes 81729959
chr2 232505017 232505032 FOXP1 JASPAR yes 81729960
chr2 232505018 232505033 FOXP1 JASPAR yes 81729961
chr2 232505018 232505039 IRF1 JASPAR yes 81729962
chr2 232505019 232505034 FOXP1 JASPAR yes 81729963
chr2 232505019 232505040 IRF1 JASPAR yes 81729964
Genes associated with rs200001573[chr2:232505019], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More