EnhancerDB
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  3. rs200018196[chr2:216705839]
Enhancers that have rs200018196[chr2:216705839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216688425 216718115 enh6146
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200018196[chr2:216705839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216705830 216705842 FOXI1 JASPAR yes 80812932
chr2 216705830 216705845 FOXP1 JASPAR yes 80812933
chr2 216705831 216705843 FOXC2 JASPAR yes 80812934
chr2 216705833 216705844 FOXA1 JASPAR yes 80812935
chr2 216705833 216705854 IRF1 JASPAR yes 80812936
chr2 216705834 216705849 FOXP1 JASPAR yes 80812937
chr2 216705834 216705855 IRF1 JASPAR yes 80812938
chr2 216705835 216705846 FOXP2 JASPAR yes 80812939
chr2 216705835 216705847 FOXC2 JASPAR yes 80812940
chr2 216705835 216705850 STAT2 JASPAR yes 80812941
chr2 216705836 216705851 FOXP1 JASPAR yes 80812942
chr2 216705838 216705853 FOXP1 JASPAR yes 80812943
chr2 216705839 216705854 FOXP1 JASPAR yes 80812944
Genes associated with rs200018196[chr2:216705839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More