EnhancerDB
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  3. rs200042150[chr1:108478853]
Enhancers that have rs200042150[chr1:108478853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs200042150[chr1:108478853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108478485 108479114 ZNF274 GTRD no Bone Marrow (K562) 107817676
chr1 108478842 108478856 ONECUT2 JASPAR yes 31370412
chr1 108478842 108478856 ONECUT3 JASPAR yes 31370413
Genes associated with rs200042150[chr1:108478853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More