EnhancerDB
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  3. rs200042584[chr1:207981707]
Enhancers that have rs200042584[chr1:207981707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200042584[chr1:207981707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207981561 207983026 ZBTB33 GTRD no Lung (A549) 21374020
chr1 207981615 207982677 ZNF274 GTRD no Cervix (HeLa-S3) 21374021
chr1 207981621 207982714 ZBTB33 GTRD no Lung (A549) 21374022
chr1 207981622 207982728 ZNF274 GTRD no Bone Marrow (K562) 21374023
chr1 207981638 207982517 ZBTB33 GTRD no Lung (A549) 21374024
chr1 207981685 207982700 ZNF143 GTRD no Epithelial (MCF-7) 21374025
chr1 207981688 207982625 ZNF274 GTRD no Blood (GM12878) 21374026
chr1 207981693 207981710 RARA JASPAR yes 34876880
chr1 207981693 207981710 RXRA JASPAR yes 34876881
chr1 207981700 207981710 TBR1 JASPAR yes 34876882
chr1 207981700 207981711 TBX20 JASPAR yes 34876883
chr1 207981700 207981711 TBX2 JASPAR yes 34876884
chr1 207981701 207981711 TBX21 JASPAR yes 34876885
Genes associated with rs200042584[chr1:207981707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More