EnhancerDB
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Enhancers that have rs200055083[chr16:29613289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200055083[chr16:29613289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29611112 29613730 ZNF274 GTRD no Bone Marrow (K562) 21702676
chr16 29612412 29614034 ZNF143 GTRD no Epithelial (MCF-7) 21702694
chr16 29612420 29614189 TCF7L2 GTRD no Colon (HCT116) 21702695
chr16 29612447 29614063 ZNF274 GTRD no Cervix (HeLa-S3) 21702696
chr16 29612455 29614260 ZNF274 GTRD no Bone Marrow (K562) 21702697
chr16 29612461 29614172 ZNF274 GTRD no Bone Marrow (K562) 21702698
chr16 29612563 29614180 ZNF274 GTRD no Bone Marrow (K562) 21702700
chr16 29612584 29614179 ZNF274 GTRD no Bone Marrow (K562) 21702702
chr16 29612586 29614179 ZNF274 GTRD no Bone Marrow (K562) 21702703
chr16 29612590 29614234 ZBTB33 GTRD no Lung (A549) 21702704
chr16 29612599 29614171 ZBTB33 GTRD no Brain (SK-N-SH) 21702705
chr16 29612603 29614037 ZNF274 GTRD no Bone Marrow (K562) 21702706
chr16 29612607 29614169 ZNF143 GTRD no Epithelial (MCF-7) 21702707
chr16 29612622 29614206 ZNF143 GTRD no Epithelial (MCF-7) 21702709
chr16 29612635 29614323 TCF7L2 GTRD no Colon (HCT116) 21702711
chr16 29612639 29614175 TCF7L2 GTRD no Colon (HCT116) 21702712
chr16 29612644 29614189 ZNF274 GTRD no Bone Marrow (K562) 21702713
chr16 29612664 29614067 ZNF143 GTRD no Epithelial (MCF-7) 21702714
chr16 29612681 29614340 TCF7L2 GTRD no Colon (HCT116) 21702716
chr16 29612685 29614073 TCF7L2 GTRD no Colon (HCT116) 21702717
chr16 29612786 29614102 ZBTB33 GTRD no Lung (A549) 21702718
chr16 29612797 29614188 ZNF274 GTRD no Bone Marrow (K562) 21702719
chr16 29612799 29614272 TCF7L2 GTRD no Colon (HCT116) 21702720
chr16 29612808 29614002 ZNF274 GTRD no Bone Marrow (K562) 21702721
chr16 29612823 29614192 TCF7L2 GTRD no Colon (HCT116) 21702722
chr16 29612883 29614186 ZNF143 GTRD no Epithelial (MCF-7) 21702725
chr16 29612902 29614086 ZNF274 GTRD no Bone Marrow (K562) 21702726
chr16 29612913 29614060 ZNF143 GTRD no Epithelial (MCF-7) 21702727
chr16 29612935 29614308 TCF7L2 GTRD no Colon (HCT116) 21702728
chr16 29612943 29614022 ZBTB33 GTRD no Brain (SK-N-SH) 21702729
chr16 29612945 29614206 ZNF143 GTRD no Epithelial (MCF-7) 21702730
chr16 29612948 29614295 TCF7L2 GTRD no Colon (HCT116) 21702731
chr16 29612963 29614183 ZNF143 GTRD no Epithelial (MCF-7) 21702732
chr16 29612969 29613296 ZNF274 GTRD no Cervix (HeLa-S3) 21702733
chr16 29612972 29613924 ZBTB33 GTRD no Lung (A549) 21702734
chr16 29612974 29614008 ZNF143 GTRD no Epithelial (MCF-7) 21702735
chr16 29612977 29614056 ZNF143 GTRD no Epithelial (MCF-7) 21702736
chr16 29612978 29613298 TCF7L2 GTRD no Colon (HCT116) 21702737
chr16 29612979 29614008 ZBTB33 GTRD no Lung (A549) 21702738
chr16 29612979 29614062 ZNF274 GTRD no Cervix (HeLa-S3) 21702739
chr16 29612983 29614060 ZNF274 GTRD no Cervix (HeLa-S3) 21702740
chr16 29612983 29614206 ZNF274 GTRD no Bone Marrow (K562) 21702741
chr16 29612986 29613766 ZNF143 GTRD no Epithelial (MCF-7) 21702742
chr16 29612996 29614116 ZNF274 GTRD no Bone Marrow (K562) 21702743
chr16 29613006 29613290 ZNF274 GTRD no Bone Marrow (K562) 21702744
chr16 29613007 29613980 ZNF143 GTRD no Epithelial (MCF-7) 21702745
chr16 29613007 29614000 ZNF274 GTRD no Cervix (HeLa-S3) 21702746
chr16 29613007 29614248 ZNF274 GTRD no Bone Marrow (K562) 21702747
chr16 29613008 29614204 ZBTB33 GTRD no Lung (A549) 21702748
chr16 29613012 29614130 ZNF143 GTRD no Epithelial (MCF-7) 21702749
chr16 29613019 29614326 TCF7L2 GTRD no Colon (HCT116) 21702751
chr16 29613020 29614178 ZNF274 GTRD no Bone Marrow (K562) 21702752
chr16 29613030 29614290 TCF7L2 GTRD no Colon (HCT116) 21702753
chr16 29613036 29614078 ZNF274 GTRD no Cervix (HeLa-S3) 21702754
chr16 29613115 29614192 ZBTB33 GTRD no Lung (A549) 21702755
chr16 29613128 29613864 ZNF143 GTRD no Epithelial (MCF-7) 21702756
chr16 29613146 29614011 ZNF274 GTRD no Bone Marrow (K562) 21702757
chr16 29613183 29614077 ZNF274 GTRD no Bone Marrow (K562) 21702758
chr16 29613194 29614013 ZNF274 GTRD no Bone Marrow (K562) 21702759
chr16 29613198 29614062 ZNF143 GTRD no Epithelial (MCF-7) 21702760
chr16 29613206 29614190 ZNF274 GTRD no Bone Marrow (K562) 21702761
chr16 29613208 29613846 ZBTB33 GTRD no Lung (A549) 21702762
chr16 29613212 29613999 ZNF274 GTRD no Bone Marrow (K562) 21702763
chr16 29613213 29613738 ZBTB33 GTRD no Lung (A549) 21702764
chr16 29613215 29614000 ZBTB33 GTRD no Brain (SK-N-SH) 21702765
chr16 29613217 29614001 ZBTB33 GTRD no Lung (A549) 21702766
chr16 29613221 29614165 TCF7L2 GTRD no Colon (HCT116) 21702767
chr16 29613223 29613809 ZNF143 GTRD no Epithelial (MCF-7) 21702768
chr16 29613241 29614032 ZNF274 GTRD no Bone Marrow (K562) 21702769
chr16 29613247 29613681 ZBTB33 GTRD no Lung (A549) 21702770
chr16 29613266 29614026 ZNF274 GTRD no Bone Marrow (K562) 21702771
chr16 29613270 29613989 ZBTB33 GTRD no Lung (A549) 21702772
chr16 29613272 29614295 ZBTB33 GTRD no Lung (A549) 21702773
chr16 29613276 29613291 MYBL2 JASPAR yes 10267095
chr16 29613283 29613293 MAX JASPAR yes 10267096
chr16 29613283 29613639 TCF7L2 GTRD no Colon (HCT116) 21702774
chr16 29613284 29613294 CLOCK JASPAR yes 10267097
chr16 29613284 29613294 NEUROG2 JASPAR yes 10267098
chr16 29613285 29614077 ZNF274 GTRD no Bone Marrow (K562) 21702775
chr16 29613289 29613304 LEF1 JASPAR yes 10267099
Genes associated with rs200055083[chr16:29613289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More