EnhancerDB
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  3. rs200057993[chr1:172883252]
Enhancers that have rs200057993[chr1:172883252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs200057993[chr1:172883252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172882979 172883475 ZNF274 GTRD no Bone Marrow (K562) 107846257
chr1 172883130 172884232 ZNF274 GTRD no Blood (GM12878) 107846258
chr1 172883239 172883252 POU3F3 JASPAR yes 33165476
chr1 172883239 172883253 POU1F1 JASPAR yes 33165477
chr1 172883240 172883252 POU3F1 JASPAR yes 33165478
chr1 172883240 172883252 POU3F2 JASPAR yes 33165479
chr1 172883240 172883253 POU2F2 JASPAR yes 33165480
chr1 172883246 172883259 POU2F2 JASPAR yes 33165486
chr1 172883251 172883261 NEUROG2 JASPAR yes 33165487
Genes associated with rs200057993[chr1:172883252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More