EnhancerDB
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  3. rs200127517[chr1:24373409]
Enhancers that have rs200127517[chr1:24373409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24370325 24381060 enh26584
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs200127517[chr1:24373409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24373397 24373418 IRF1 JASPAR yes 27478460
chr1 24373399 24373414 PRDM1 JASPAR yes 27478461
chr1 24373404 24373419 FOXP1 JASPAR yes 27478462
Genes associated with rs200127517[chr1:24373409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More