EnhancerDB
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  3. rs2001380[chr17:45940310]
Enhancers that have rs2001380[chr17:45940310]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 45938065 45965315 enh17194
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs2001380[chr17:45940310]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 45940038 45940568 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21766919
chr17 45940063 45940579 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21766920
chr17 45940209 45940662 TCF7L2 GTRD no Colon (HCT116) 21766921
chr17 45940262 45940466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21766922
chr17 45940263 45940739 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21766923
Genes associated with rs2001380[chr17:45940310], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 45922279 45933240 - SP6 ENSG00000189120.3 45933240 7070 Spleen 1.21061e-13 15980