EnhancerDB
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  3. rs200164619[chr17:78992474]
Enhancers that have rs200164619[chr17:78992474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78989925 79003875 enh17432
Prostate (RWPE1) Blood (T-cell) Esophagus Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs200164619[chr17:78992474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78991802 78992604 POLR2A UCSC Txn Factor no Conserved 108308283
chr17 78991941 78992509 ZNF143 GTRD no Epithelial (MCF-7) 108308291
chr17 78991986 78992562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308301
chr17 78991998 78992514 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308305
chr17 78992010 78992601 TCF7L2 GTRD no Colon (HCT116) 21797476
chr17 78992010 78992601 TCF7L2 GTRD no Colon (HCT116) 108308306
chr17 78992041 78992565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308309
chr17 78992122 78992531 TCF7L2 GTRD no Colon (HCT116) 21797477
chr17 78992122 78992531 TCF7L2 GTRD no Colon (HCT116) 108308312
chr17 78992125 78992601 TCF7L2 GTRD no Colon (HCT116) 21797478
chr17 78992125 78992601 TCF7L2 GTRD no Colon (HCT116) 108308313
chr17 78992145 78992574 PHF8 UCSC Txn Factor no Conserved 108308314
chr17 78992145 78992574 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308315
chr17 78992217 78992721 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308316
chr17 78992274 78992678 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308317
chr17 78992455 78992474 PAX5 JASPAR yes 56297527
chr17 78992458 78992476 MAFF JASPAR yes 56297528
chr17 78992460 78992475 MAFK JASPAR yes 56297530
chr17 78992462 78992483 REST JASPAR yes 56297531
Genes associated with rs200164619[chr17:78992474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More