EnhancerDB
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  3. rs200227590[chr12:47686232]
Enhancers that have rs200227590[chr12:47686232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs200227590[chr12:47686232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47686211 47686232 IRF1 JASPAR yes 120692539
chr12 47686215 47686236 IRF1 JASPAR yes 120692541
chr12 47686223 47686234 FOXC1 JASPAR yes 120692543
chr12 47686230 47686241 FOXB1 JASPAR yes 120692544
chr12 47686231 47686239 FOXL1 JASPAR yes 120692545
chr12 47686231 47686242 FOXB1 JASPAR yes 120692546
chr12 47686232 47686243 FOXB1 JASPAR yes 120692547
Genes associated with rs200227590[chr12:47686232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More