EnhancerDB
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  3. rs200230955[chr1:3476398]
Enhancers that have rs200230955[chr1:3476398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs200230955[chr1:3476398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3476389 3476400 CEBPB JASPAR yes 26296109
chr1 3476390 3476403 NFKB1 JASPAR yes 26296110
chr1 3476390 3476403 NFKB2 JASPAR yes 26296111
Genes associated with rs200230955[chr1:3476398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More