EnhancerDB
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  3. rs2002390[chr19:4814000]
Enhancers that have rs2002390[chr19:4814000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4796225 4815632 enh17875
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs2002390[chr19:4814000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4813854 4815088 TEF1 GTRD no Bone (Osteoblast) 21842369
chr19 4813974 4814224 ZNF143 GTRD no Epithelial (MCF-7) 21842370
chr19 4813982 4814290 ZNF274 GTRD no Cervix (HeLa-S3) 21842371
chr19 4813993 4814013 TP63 JASPAR yes 112192807
chr19 4813994 4814014 ESR1 JASPAR yes 112192808
chr19 4813996 4814007 NFE2 JASPAR yes 112192809
chr19 4813997 4814008 FOSL2 JASPAR yes 112192810
chr19 4813997 4814015 ESR2 JASPAR yes 112192811
chr19 4813999 4814014 ESR2 JASPAR yes 112192812
chr19 4813999 4814015 ZNF143 JASPAR yes 112192813
Genes associated with rs2002390[chr19:4814000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More